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  • Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)

    Python MIT License Updated Jun 16, 2023
  • A lite implementation of tfmodisco, a motif discovery algorithm for genomics experiments.

    Python MIT License Updated Jun 9, 2023
  • intervene Public

    Forked from asntech/intervene

    Intervene: a tool for intersection and visualization of multiple genomic region and gene sets

    Python Other Updated Jul 23, 2020
  • dragonn Public

    Forked from kundajelab/dragonn

    A toolkit to learn how to model and interpret regulatory sequence data using deep learning.

    Jupyter Notebook MIT License Updated Jul 22, 2019
  • SaGePhy Public

    A probabilistic simulation framework for sub-gene and gene phylogeny evolution

    Java 2 2 Other Updated Apr 7, 2019
  • kerasAC Public

    Forked from kundajelab/kerasAC

    keras accessibility models: code to train, predict, interpret

    Python MIT License Updated Feb 14, 2019
  • iC10 Public

    Forked from cran/iC10

    ❗ This is a read-only mirror of the CRAN R package repository. iC10 — A Copy Number and Expression-Based Classifier for Breast Tumours

    R Updated Feb 8, 2019
  • A implementation of DANN with pytorch

    Python MIT License Updated Dec 12, 2018
  • A collection of implementations of adversarial domain adaptation algorithms

    Python Updated May 3, 2018
  • CSE3000_BCI Public

    CSE 3000 Presentation: Brain-Computer Interface (BCI)

    TeX Updated Apr 19, 2017