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change dockerfile
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RAHenriksen committed Nov 21, 2024
1 parent 2731fcb commit e0ce24b
Showing 1 changed file with 1 addition and 3 deletions.
4 changes: 1 addition & 3 deletions Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -26,8 +26,6 @@ RUN /opt/conda/bin/conda init bash
RUN bash install.sh -i LOCAL

# Set environment variables
ENV BIFROST_INSTALL_DIR='/app'
# Use ARG for database key and set at runtime

# Set the default command to run the Python module
CMD ["bash", "-c", "conda run -n $CONDA_ENV_NAME python -m bifrost_amrfinderplus"]
CMD ["bash", "-c", "conda run -n $CONDA_ENV_NAME && make test && make clean"]

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