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Jan 13, 2022 - HTML
deseq2
Here are 99 public repositories matching this topic...
RNA-seq workflow using STAR and DESeq2
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Aug 1, 2024 - Python
Brings bulk and pseudobulk transcriptomics to the tidyverse
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Nov 21, 2024 - R
Transcript quantification import for modular pipelines
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Mar 23, 2024 - R
Statistical Analysis of RNA-Seq Tools
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Jun 13, 2023 - R
Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
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Dec 7, 2024 - Nextflow
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Mar 23, 2021 - R
R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
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May 21, 2024 - R
Differential gene expression analysis and pathway analysis of RNAseq data
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Dec 4, 2024 - Nextflow
This RNAseq data analysis tutorial is created for educational purpose
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Oct 1, 2024 - R
NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization
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Apr 19, 2020 - HTML
a web-based R shiny application that wraps DESeq2 R package
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Apr 19, 2020 - R
A quick recap of widely used differential analyses methods in R for RNA-seq experiments
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Mar 12, 2020
Differential expression analysis: DESeq2, edgeR, limma. Realized in python based on rpy2
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May 7, 2021 - Jupyter Notebook
An application for exploring and visualizing differential gene expression data created with DESeq2
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Apr 10, 2024 - Vue
Generate HTML report for a set of genomic regions or DESeq2/edgeR results
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May 7, 2023 - R
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