Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.
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Mar 17, 2025 - Nextflow
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lfq
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Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.
workflow pipeline nextflow proteomics dia mass-spectrometry openms proteogenomics tmt nf-core mass-spec lfq
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May 6, 2024 - Nextflow
A comprehensive R package for label-free proteomics data analysis and modeling
machine-learning r modeling rstats proteomics mass-spectrometry r-package differential-expression biomarkers lfq
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Jul 21, 2023 - R
An open-source Python package for accurate and sensitive peptide and protein quantification.
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Mar 19, 2025 - Python
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