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wrshoemaker Follow

Overview Repositories 74 Projects 0 Packages 0 Stars 165

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wrshoemaker

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🇮🇹

Will Shoemaker wrshoemaker

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Postdoc researching quantitative microbial ecology and evolution in Jacopo Grilli's group @ ICTP.

18 followers · 52 following

ICTP
Trieste, Italy
20:59 (UTC +01:00)
https://wrshoemaker.github.io/
@ShoeStrapped
@shoestrapped.bsky.social

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Overview Repositories 74 Projects 0 Packages 0 Stars 165

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wrshoemaker.github.io Public
Forked from academicpages/academicpages.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

HTML 1 MIT License Updated Dec 15, 2024
ictp_numerical_methods_python_course Public

Jupyter Notebook Updated Nov 18, 2024
gutsyphage Public

Python Updated Sep 29, 2024
experimental_macroecology Public

Python GNU General Public License v3.0 Updated Sep 28, 2024
SporeCosts Public
Forked from LennonLab/SporeCosts

Final repository for the spore cost project.

R MIT License Updated Aug 29, 2024
macroeco_phylo Public

Python GNU General Public License v3.0 Updated Dec 12, 2023
StrainPrevalence Public

Python BSD 2-Clause "Simplified" License Updated Jul 13, 2023
coevo-seedbank-seq Public
Forked from LennonLab/coevo-seedbank-seq

sequencing data analysis

GDScript GNU General Public License v3.0 Updated Jun 26, 2023
snv_prevalence Public

Python BSD 2-Clause "Simplified" License Updated Jan 23, 2023
Bacillus_Evol_Timeseries Public
Forked from MURI2/Bacillus_Evol_Timeseries

Python GNU General Public License v3.0 Updated Mar 30, 2022
BIG_2021_microbiome_evolution Public

Python 1 BSD 2-Clause "Simplified" License Updated Sep 15, 2021
ParEvol Public
Forked from LennonLab/ParEvol

Python 1 GNU General Public License v3.0 Updated Aug 20, 2021
LTDE Public
Forked from LennonLab/LTDE

GDScript GNU General Public License v3.0 Updated Jun 2, 2021
CompPopGenMicrobiomeReview Public
Forked from garudlab/CompPopGenMicrobiomeReview

Python BSD 2-Clause "Simplified" License Updated May 25, 2021
Phylo_Evol_Timeseries Public
Forked from MURI2/Phylo_Evol_Timeseries

Python GNU General Public License v2.0 Updated Apr 30, 2021
NonSynLD Public

BSD 2-Clause "Simplified" License Updated Feb 9, 2021
slim_recipes Public

Playing around with SLiM

Python Updated Nov 17, 2020
Task2 Public
Forked from MURI2/Task2

Code, documents, and data sets related to MURI2 Task 2.

Python Updated Aug 21, 2020
PopGen Public

Repo of population genetic models and other evolutionary/ eco-evolutionary models and code

Parrot 1 Updated Aug 21, 2020
Task2_Traits Public
Forked from MURI2/Task2_Traits

Python Updated Aug 21, 2020
PopGenVisuals Public

A repo containing Python code and Jupyter notebooks for the visualization of population genetic and evolutionary processes

HTML Updated Aug 21, 2020
rec-genome-tools Public
Forked from rec3141/rec-genome-tools

Perl Updated Aug 20, 2020
Dormancy_EAD Public

Shell Updated Aug 20, 2020
EcoEvoMet Public

Python Updated Apr 7, 2020
NetworkEvolution Public
Forked from LennonLab/NetworkEvolution

HTML GNU General Public License v3.0 Updated Apr 6, 2020
Evol_16S Public
Forked from LennonLab/Evol_16S

simulation of 16s evolution

Python Updated Apr 6, 2020
MinimalCell Public
Forked from RoyBoy432/MinimalCell_development

We study the evolution of synthetic organisms.

GAP GNU General Public License v3.0 Updated Jan 6, 2020
BacillusBarcodes Public
Forked from LennonLab/BacillusBarcodes

Code for analyzing bacillus barcode competition assays

HTML Updated Oct 7, 2019
MutationDorm Public
Forked from LennonLab/MutationDorm

Repository for simulating the role of dormancy in preventing the accumulation of deleterious mutations under stress

Python Updated Feb 26, 2019
microbiome_evolution Public
Forked from benjaminhgood/microbiome_evolution

Scripts for analyzing evolutionary dynamics in large cohorts of human gut metagenomes

Python BSD 2-Clause "Simplified" License Updated Jan 25, 2019

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