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Commits on Jul 28, 2021

• Merge pull request scverse#1953 from zktuong/master

  Show description for 4e4e6ab
  Zethson

  authored
  4e4e6ab

Commits on Jul 27, 2021

• Add PASTE to Scanpy ecosystem. (scverse#1950)

  Show description for 91af268
  

  mrland99

  and

  ivirshup

  authored
  91af268

• Update ecosystem.rst

  zktuong

  committed
  e9d892f

Commits on Jul 26, 2021

• Update ecosystem.rst

  zktuong

  committed
  eb06ffb

Commits on Jul 19, 2021

• Update ecosystem.rst

  zktuong

  committed
  6bb9143

• Fix _rank_genes_groups_plot for filtered genes (scverse#1942)

  Show description for ecd2845
  Koncopd

  authored
  ecd2845

Commits on Jul 16, 2021

• Sphinx 4.1 fixes (scverse#1948)

  flying-sheep

  authored
  b34c45c

Commits on Jul 12, 2021

• compare_abs argument in filter_rank_genes_groups (scverse#1649)

  Show description for e1bfb46
  Koncopd

  authored
  e1bfb46

• Start 1.8.2 release notes file (scverse#1945)

  Show description for 8460225
  ivirshup

  authored
  8460225

Commits on Jul 7, 2021

• Prep 1.8.1 (scverse#1937)

  Show description for 5f19a29
  ivirshup

  authored
  5f19a29

• Fix use_raw error with sc.tl.rank_genes_groups (scverse#1934)

  Show description for 3c72565
  ivirshup

  authored
  3c72565

Commits on Jul 5, 2021

• Fix paga_compare node positions (scverse#1898)

  Show description for d072abd
  ivirshup

  authored
  d072abd

• Score genes reproducibility fix (scverse#1890)

  Show description for 27b6fed
  

  Iwo-K

  and

  ivirshup

  authored
  27b6fed

• Fixes for pandas 1.3.0 (scverse#1918)

  Show description for c9b5913
  ivirshup

  authored
  c9b5913

Commits on Jun 30, 2021

• Start 1.8.1 release notes (scverse#1907)

  ivirshup

  authored
  87396a8

Commits on Jun 29, 2021

• Start release notes for 1.9.0 (scverse#1906)

  ivirshup

  authored
  93f927a

• Finalize release notes (scverse#1905)

  Show description for f732706
  

  ivirshup

  and

  giovp

  authored
  f732706

• Reorganize reference docs (scverse#1753)

  Show description for 7791e75
  ivirshup

  authored
  7791e75

Commits on Jun 27, 2021

• Ecosystem + community docs (scverse#1856)

  Show description for d3e6e42
  ivirshup

  authored
  d3e6e42

Commits on Jun 24, 2021

• Drop python 3.6 support (scverse#1897)

  Show description for 4f2a79d
  ivirshup

  authored
  4f2a79d

Commits on Jun 23, 2021

• Deprecate multicore tsne (scverse#1854)

  Show description for 7d455ae
  ivirshup

  authored
  7d455ae

• If raw was not used, use_raw should be False (scverse#1895)

  Show description for fb9e12f
  ivirshup

  authored
  fb9e12f

Commits on Jun 22, 2021

• new options to rank_genes_groups plots (scverse#1529)

  Show description for 9e1a27b
  

  fidelram

  and

  ivirshup

  authored
  9e1a27b

• Fixed randomness in tl.diffmap - compute_eigen (v0 argument) (scverse#1858)

  Show description for 0ffa787
  

  Iwo-K

  and

  ivirshup

  authored
  0ffa787

Commits on Jun 18, 2021

• Dict literal typos in _baseplot_class.py (scverse#1877)

  Show description for 84a80e7
  

  chris-rands

  and

  ivirshup

  authored
  84a80e7

• Added Cube Gene Learning Algorithm to Ecosystem (scverse#1883)

  Show description for ed364a8
  

  connerlambden

  and

  ivirshup

  authored
  ed364a8

• Set theme fix (scverse#1886)

  Show description for 825d910
  ivirshup

  authored
  825d910

Commits on May 26, 2021

• Add more pre-commit checks (scverse#1848)

  Show description for 4dd8de9
  Zethson

  authored
  4dd8de9

Commits on May 17, 2021

• Fix ipython detection (scverse#1844)

  Show description for bcfa925
  ivirshup

  authored
  bcfa925

Commits on May 3, 2021

• added example for PCA loadings plot (scverse#1815)

  Show description for 3ff44ce
  

  bio-la

  and

  giovp

  authored
  3ff44ce

• Fix rank_genes_groups_violin when use_raw=False (scverse#1669)

  Show description for cb1053b
  

  mvdbeek

  and

  giovp

  authored
  cb1053b

Commits on Apr 7, 2021

• Update release notes (scverse#1787)

  ivirshup

  authored
  17b1b1b

• Add 1.7.3.rst (scverse#1786)

  ivirshup

  authored
  31ba727

• Move paga path bugfix note to 1.8.0 release (scverse#1784)

  ivirshup

  authored
  b63a7bf

Commits on Mar 31, 2021

• Added dorothea/progeny (scverse#1767)

  Show description for 7abd072
  

  PauBadiaM

  and

  ivirshup

  authored
  7abd072

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