Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

Multi-subject Single Cell Deconvolution

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

A repository full of Pynecone example apps.

BISulfite-seq CUI Toolkit

Conda recipes for the bioconda channel.

Aggregate results from bioinformatics analyses across many samples into a single report.

This is the development home of the workflow management system Snakemake. For general information, see

A tool to map bisulfite converted sequence reads and determine cytosine methylation states

XL-mHG: A Semiparametric Test for Enrichment in Ranked Lists.

Blazingly fast terminal recorder that generates animated gif images for the web written in rust

Deep probabilistic analysis of single-cell omics data

tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies

Template repository for Python projects

🛠 Python project template generator with batteries included

EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.

PyTorch implementation of TabNet paper : https://arxiv.org/pdf/1908.07442.pdf

A quick overhaul of CelFiE — cfDNA cell type of origin estimation